Package mrs_tools
NIfTI-MRS (Magnetic Resonance Spectroscopy) tools
https://github.com/wtclarke/nifti_mrs_tools
This package contains python-based tools for representing, validating, and
manipulating the NIfTI-MRS format. NIfTI-MRS is a standardized format for
storing Magnetic Resonance Spectroscopy data.
These tools are used extensively in the spec2nii format conversion program and
the FSL-MRS analysis software. However, this library can also be used as a
stand-alone set of tools.
If you use these tools please cite: Clarke, WT, Bell, TK, Emir, UE, et al.
NIfTI-MRS: A standard data format for magnetic resonance spectroscopy. Magn
Reson Med. 2022; 88: 2358- 2370. doi:10.1002/mrm.29418
Version: 1.2.1
General Commands | |
| mrs_tools | mrs_tools – NIfTI-MRS (Magnetic Resonance Spectroscopy) tools |
| mrs_tools-conjugate | mrs_tools conjugate – Conjugate data to correct phase/frequency convention in a NIfTI-MRS file |
| mrs_tools-info | mrs_tools info – Information about the NIfTI-MRS file |
| mrs_tools-merge | mrs_tools merge – Merge NIfTI-MRS along higher dimensions |
| mrs_tools-reorder | mrs_tools reorder – Reorder higher dimensions of NIfTI-MRS |
| mrs_tools-reshape | mrs_tools reshape – Reorder higher dimensions of NIfTI-MRS |
| mrs_tools-split | mrs_tools split – Split NIfTI-MRS along higher dimensions |
| mrs_tools-vis | mrs_tools vis – Quick visualisation of a NIfTI-MRS file or FSL-MRS basis set |