Package SIBsim4

Align expressed RNA sequences on a DNA template

http://sibsim4.sourceforge.net

SIBsim4 is a modified version of the sim4 program, which is a
similarity-based tool for aligning an expressed DNA sequence (EST,
mRNA) with a genomic sequence.

General Commands
Command Description
SIBsim4 align RNA sequences with a DNA sequence, allowing for introns