tff_visualize_overlap - Man Page

manual page for usage: tff_visualize_overlap [-h] [--remove_invalid] IN_TRACTOGRAM reference

Description

usage: tff_visualize_overlap [-h] [--remove_invalid] IN_TRACTOGRAM reference

Display a tractogram and its density map (computed from Dipy) in rasmm, voxmm and vox space with its bounding box.

positional arguments

IN_TRACTOGRAM

Tractogram filename. Format must be one of trk, tck, vtk, fib, dpy, trx.

reference

Reference anatomy for tck/vtk/fib/dpy file support (nii or nii.gz).

options

-h, ā€‰--help

show this help message and exit

--remove_invalid

Removes invalid streamlines to avoid the density_mapfunction to crash.

tff_visualize_overlap: error: the following arguments are required: IN_TRACTOGRAM, reference

Info

April 2024 usage: tff_visualize_overlap [-h] [--remove_invalid] IN_TRACTOGRAM reference