srf2fasta - Man Page
Converts SRF files to fasta format
Synopsis
srf2fasta [-C] srf_archive
Description
srf2fasta extracts sequences from an SRF archive and writes them in fasta format to stdout.
Options
- -C
Masks out sequences tagged as bad quality.
Examples
To extract only the good quality sequences from runX.srf into runX.fasta.
srf2fasta -C runX.srf > runX.fasta
Author
James Bonfield, Wellcome Trust Sanger Institute
Info
September 19 Staden io_lib