qsub man page

qsub — submit a batch job in a familiar PBS format

TL;DR

qsub script.sh

qsub -l walltime=1:2:3 script.sh

qsub -l nodes=2:ppn=4 script.sh

qsub -q queue_name script.sh

Synopsis

qsub  [-a start_time]
     [-A account]
     [-b y|n]
     [-e err_path]
     [-I]
     [-l resource_list]
     [-m mail_options] [-M user_list]
     [-N job_name]
     [-o out_path]
     [-p priority]
     [-pe shm task_cnt]
     [-P wckey]
     [-q destination]
     [-r y|n]
     [-v variable_list]
     [-V]
     [-wd workdir]
     [-W additional_attributes]
     [-h]
     [script]

Description

The qsub submits batch jobs. It is aimed to be feature-compatible with PBS' qsub.

Options

-a

Earliest start time of job. Format: [HH:MM][MM/DD/YY]

-A account

Specify the account to which the job should be charged.

-b y|n

Whether to wrap the command line or not

-e err_path

Specify a new path to receive the standard error output for the job.

-I

Interactive execution.

-J job_array

Job array index values. The -J and -t options are equivalent.

-l resource_list

Specify an additional list of resources to request for the job.

-m mail_options

Specify a list of events on which email is to be generated.

-M user_list

Specify a list of email addresses to receive messages on specified events.

-N job_name

Specify a name for the job.

-o out_path

Specify the path to a file to hold the standard output from the job.

-p priority

Specify the priority under which the job should run.

-pe shm cpus-per-task

Specify the number of cpus per task.

-P wckey

Specify the wckey or project of a job.

-r y|n

Whether to allow the job to requeue or not.

-t job_array

Job array index values. The -J and -t options are equivalent.

-v [variable_list]

Export only the specified environment variables. This option can also be used with the -V option to add newly defined environment variables to the existing environment. The variable_list is a comma delimited list of existing environment variable names and/or newly defined environment variables using a name=value format.

-V

The -V option to exports the current environment, which is the default mode of options unless the -v option is used.

-wd workdir

Specify the workdir of a job.  The default is the current work dir.

-? | --help

brief help message

--man

full documentation

Referenced By

qalter(1), qrerun(1).

2017-11-16 perl v5.26.1 User Contributed Perl Documentation