plotphysio - Man Page

plotphysio [-h] [-s SHOWSAMPLES] filename

Reads and plots active (i.e. non-zero) signals from SIEMENS advanced physiological log/DICOM files

This function expects to find either a combination of individual logfiles (*_ECG.log, *_RESP.log, *_PULS.log, *_EXT.log, *_Info.log) generated by >=R013 sequences, or a single encoded "_PHYSIO" DICOM file generated by >=R015 sequences.

filename

Either the fullpath of the DICOM file or the base name of the PHYSIO logfiles (fullpath without suffix and file extension, e.g. 'foo/bar/Physio_DATE_TIME_UUID'

-s SHOWSAMPLES, --showsamples SHOWSAMPLES

The nr of plotted samples of the physiological traces (default: 1000, nothing is plotted if 0)

examples:
 plotphysio myproject/sub-001/MR000000.dcm
 plotphysio -s 2000 myproject/sub-001/Physio_20200428_142451_007e910e-02d9-4d7a-8fdb-8e3568be8322

@author: Marcel Zwiers

Marcel Zwiers <m.zwiers@donders.ru.nl>