csg_fmatch - Man Page

Part of the VOTCA package


csg_fmatch [Options]

csg_fmatch [--help]


Perform force matching (also called multiscale coarse-graining)


Allowed options:

 -h [ --help ]             display this help and exit
 --verbose                 be loud and noisy
 --verbose1                be very loud and noisy
 -v [ --verbose2 ]         be extremly loud and noisy
 --top arg                 atomistic topology file
 --options arg             options file for coarse graining
 --trj-force arg           coarse-grained trajectory containing forces of
                         already known interactions
Mapping options:
 --cg arg                  coarse graining mapping and bond definitions
 --map-ignore arg          list of molecules to ignore separated by ;
 --no-map                  disable mapping and act on original trajectory
Trajectory options:
 --trj arg                 atomistic trajectory file

--begin arg (=0)          skip frames before this time (only works for
                         Gromacs files)
 --first-frame arg (=0)    start with this frame
 --nframes arg             process the given number of frames


Written and maintained by the VOTCA Development Team <devs@votca.org>


csg_fmatch User Manual VOTCA Development Team